Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881218.1_cds_XP_016437692.1_33426
CDS Infomation

[gene=LOC107763717] [db_xref=GeneID:107763717] [protein=probable pectinesterase/pectinesterase inhibitor 36] [protein_id=XP_016437692.1] [location=join(16576..17035,17965..18288,18605..19296)] [gbkey=CDS]
Sequence

ATGTCCAGCTGGAGTTTCACCATTTTTCTTCTTCCTCTTCTTATTTTAGCCATTGCTACT
AATGTTGTCACTAGCAACCAAGATCTTGATGAGGTGATCCAAAGAACAAGGTCTGGGGTG
TTAAATGCCATGAAATGGGCTCAGGGTCTAAAAACACTTGACAAAGCTGACCGAGATGGT
TCGACAAATTTTGCAGGCATTGAGTGTGTGAAGCTGTATGAAGATACTGAGCCAAGGCTA
GCACAGCTAGTCTCTGATGAGAAGTATTATAGCCATGATGATGCTGTTACTTGGCTAAGT
GCAGCTCTAGCAAGCCATAGGAGTTGTTTAGATGGATTGGAAGAGAAAGGATTGATTTTT
AAAAGTGAAGAGGCTCGAAACTTGACTTTGTTGCTGAAGGATGCTTTGTTTCATTATGGA
CAACGACTAAGGAGCAGTAGAAGAGCTAATACTAGAAAGGGGGCACGACCGAGACCAATC
TCTAATGAAGGTCGGGGGCTTTTGGTATCATGGAATGCAGCCACATCCAAAGCTGATCTA
GTCGTTGCACAAGATGGTTCAGGTAATTACAAGACTATCAACGAGGCTGTGGCTGCACTC
TCTCGGATGACACGACCAGAAAGAACAATTGTATATGTCAAATCTGGTGTATACCGCGAA
AATGTTGAAATTGAAAGGGGACTCAAGAATTTGATGTTTGTTGGTGATGGTATTGACAAA
ACTATTGTGACTGGTAATAAAAATGTCCGAGATGGAGCTACCACCTTAAGCTCAGCTACA
TTTGGTGTGTCTGCTGATGGATTTTGGGCAAGGGACATGACATTTGAAAACACAGCAGGA
CCACACAAACATCAAGCAGTGGCATTAAGAGCAGGCTCAGATCTCTCCATTTTCTATCGT
TGCAGCTTCAGAGGTTATCAAGACACGCTCTTAGTACACTCACTGAGACAATTTTATCGC
GATTGTCACATATATGGCACGGTAGACTTCATATTTGGTGATGCAGCCGCCGTGTTTCAA
AACTGCGACATTTTTGTAAAGAGACCAATGGGTCACCAATCTAACATGATAACAGCGCAG
GGAAGAGACGACTCGAATGAAAATACAGGGATTGCTATACTAAATTCGCGAGTTTCTCCA
TCTTCGGAGTTCAGTGCTGTTAAAGGGAGTTTCCAGAATTACCTAGGAAGACCGTGGAAG
AAATATTCAAGGACAGTTTTTATTAAGACGGATTTGGATGGTTTGATTCACCCCCAAGGG
TGGAAAGAATGGAGTGGTAATTTTGCACTTTCAACATTATATTATGGAGAATACATGAAT
ACAGGTAGTGGAGCTGATACTGGAAACAGAGTAAATTGGCCTGGTTTTCACGTGTTACGT
GATGCCAATGAAGCAAGTCCATTTACAGTAAGAAATTTCATACAGGGTGAATCTTGGATT
CCAGCAAGTGGAGTACCATATTTGGTTGACATATGA

Peptide Sequence

PEP ID

XP_016437692.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 36 [Nicotiana tabacum]
Sequence

MSSWSFTIFLLPLLILAIATNVVTSNQDLDEVIQRTRSGVLNAMKWAQGLKTLDKADRDG
STNFAGIECVKLYEDTEPRLAQLVSDEKYYSHDDAVTWLSAALASHRSCLDGLEEKGLIF
KSEEARNLTLLLKDALFHYGQRLRSSRRANTRKGARPRPISNEGRGLLVSWNAATSKADL
VVAQDGSGNYKTINEAVAALSRMTRPERTIVYVKSGVYRENVEIERGLKNLMFVGDGIDK
TIVTGNKNVRDGATTLSSATFGVSADGFWARDMTFENTAGPHKHQAVALRAGSDLSIFYR
CSFRGYQDTLLVHSLRQFYRDCHIYGTVDFIFGDAAAVFQNCDIFVKRPMGHQSNMITAQ
GRDDSNENTGIAILNSRVSPSSEFSAVKGSFQNYLGRPWKKYSRTVFIKTDLDGLIHPQG
WKEWSGNFALSTLYYGEYMNTGSGADTGNRVNWPGFHVLRDANEASPFTVRNFIQGESWI
PASGVPYLVDI

Transcript Sequence

Gene sequence data has not been registered.